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edited title

edited Feb 21, 2019 at 0:26

user313992

loop to traverse subdirectories and execute a perl script into each subdirectoriesubdirectory

asked Feb 20, 2019 at 22:16

I have a parent directory with multiples subdirectories like this

Parent_directory subdirectory_1 perlscript.pl file.fasta subdirectory_2 perlscript.pl file_2.fasta

And I would like to run the perl scipt in each subdirectory. I'm trying with the next command

find . -type d | while read d; do perl hoz-3-v1c.pl $d/* ; done

but the output is directed to the parent directory and I want the output in each subdirectory